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Market
Will LexicMap be recognized with a major award or accolade in genomic research by the end of 2024?
2
Resolution / Starting Odds
Yes, in the field of bioinformatics • 25%
Yes, in the field of genomics • 25%
Yes, in another scientific field • 25%
No • 25%
Official announcements from awarding bodies or genomic research organizations
Story
LexicMap Aligns 30k Hits in 1 Minute, Advancing Genomic Research
Sep 2, 2024, 04:05 PM
LexicMap is a newly developed sequence alignment tool designed to efficiently handle queries against millions of prokaryotic genomes. LexicMap allows for full alignment of bacterial and archaeal data, with the capability to perform alignments with higher sensitivity as query divergence decreases from 90% to 80% for queries of 1 kb or more. The tool can align a single gene against 2.34 million prokaryotic genomes from GenBank and RefSeq in a time frame ranging from 36 seconds for rare genes to 15 minutes for 16S RNA genes. A key feature of LexicMap is its use of a small set of probe k-mers to efficiently index the database, enabling fast and low-memory alignment processes. Notably, it can search for a gene with over 30,000 hits against 2 million bacterial genomes within 1 minute. The development of LexicMap is expected to have a substantial impact on advancing microbial genomics research.
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Yes • 50%
No • 50%
Secures funding only • 25%
Secures partnership deal only • 25%
Secures both funding and partnership deal • 25%
Secures neither • 25%
Turing Award • 25%
ACM Award • 25%
Industry-specific Award • 25%
No Award • 25%
Yes • 50%
No • 50%
Yes • 50%
No • 50%
Yes • 50%
No • 50%
Yes, in the US • 33%
Yes, internationally • 33%
Yes, both in the US and internationally • 33%
No • 33%
Turing Award • 33%
Nobel Prize • 33%
Breakthrough Prize • 33%